CDS

Accession Number TCMCG006C28188
gbkey CDS
Protein Id XP_022548452.1
Location join(19434497..19434617,19434717..19434861,19434934..19435087,19435182..19435337,19435411..19435641,19435710..19435853,19436047..19436137,19436251..19436366,19436472..19436592,19436969..19437081,19437164..19437229,19437316..19437444,19437530..19437667,19437749..19437916)
Gene LOC106399729
GeneID 106399729
Organism Brassica napus

Protein

Length 630aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022692731.1
Definition methionine--tRNA ligase, cytoplasmic-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03659        [VIEW IN KEGG]
R04773        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01874        [VIEW IN KEGG]
EC 6.1.1.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00450        [VIEW IN KEGG]
ko00970        [VIEW IN KEGG]
map00450        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGACGACGGCGGCACGAGCGCCCCAAAGTTACCGATCCCGGGAAAGAGGAACATACTAATCACGAGTGCTCTGCCTTACGTCAACAACGTCCCTCATCTCGGAAACATCATCGGATGTGTTCTGAGTGCTGATGTGTATGCAAGATACTGTCGTCTCCGTGGGTACAATGCGATATATATATGTGGGACTGATGAATATGGAACTGCTACTGAGACCAAAGCTCTGGAGGAGAACTGCTCCCCAAAAGAAATCTGTGACAAGTACCATGCCATTCACAAAGAAGTTTATGAGTGGTTTGATATAAGTTTTGACAAGTTTGGGCGGACTTCAACTCCTGAACAGACTCAAGTCTGCCAAGCTATTTTCAATAAGTTGTTTGATAACAACTTTCTTTCGGAGAACACCATGCAGCAGCTTTACTGCGATACATGCAAGAAGTTCTTAGCTGACCGCCTTGTTGAGGGTTCTTGCCCGTTTAAAGAATGTAACTATGATTCTGCTCGTGGAGATCAGTGTGAAAATTGTGGAAAGCTCCTTAATCCTACCGAACTCAAAGATCCCAGGTGCAAGGTCTGTCAAACTACACCCCGAATTCGTGACACAGACCACCTGTTTATTGAGCTTCCGTTGCTGAAAGATAAGTTGGAAGAGTATATTAACGAGACATCTGTTACGGGATCTTGGAGTCAAAACGCTATTCAAACGACGAAAGCATGGCTTAAGGAAGGGCTTAGACAGAGATGTATTACAAGGGATCTGAAGTGGGGAGTTCCTGTTCCACATGAGAAATATAAGGAAAAAGTCTTTTACGTGTGGTTTGATGCTCCTATTGGGTACGTCTCAATAACGTCATGCTACACATCTGAATGGGAGAAGTGGTGGAAGAATCCTGAGAATGTGGAGCTTTATCAGTTTATGGGGAAAGACAACGTGCCTTTTCACACTGTGATGTTTCCATCTACGCAGCTTGGAACTGGGGAGAATTGGACACTGATGAAGACAATCAGTGTGACTGAATATTTAAATTACCAAGATGGGATTTCAGGAAAGTTCTCCAAGAGTAAAGGTGTTGGAGTGTTTGGTAATGATGTAAAAAGTACAAATATCCCTGTCGAAGTTTGGAGATATTACTTACTGGCGAACAGGCCTGAGGTGTCGGACACACTATTTACATGGAAAGATTTGCAAGCAAAACTGACTGGCGAGTTACTGAATAACCTAGGCAACTTTGTTAACCGAGTTCTGACTTTTATAGCAAAGCCTGAACCTGCAGGTTATGGGTCTGTCATTCCTGATGCTCTTGGTGCTGAATCTCATCCTTTAACGCAATCTATGGCTGAAAATGTTGGAAAATTTGTGGAGCAGTATGTTGAAGCCATGGAAAAGGTTAAGCTCAAGCAGGGTCTGAAAATTGCTATGAGCATCTCGAATGAAGGGAACGCATACTTGCAGGAAGCCAAATTTTGGAAACTTTACAAGGAAGATAAACCTTCTTGTGCAATTGTTATAAGAAGTGCTGCTGGTTTAGTTCATCTTCTTGCACAATTGTTAGAACCTTTCATGCCATCATTTTCTCGTGAGGTATTTAAACAGCTAAATTTGCCACTACAATTTTCACTCTCTGACGAGGGAGGAGAGGTTTTATTAGCAAGTAGACCGTGGGAGATTCTGCCTCGCAATCACAAGATAGGCACCCCTCAACCATTGTTCAAGGAATTGACAGATGAAGAAGTGCAACAGTACAAAGACAAGTTTGCTGGAAATCAGGCTGATAGACGTGCTAGGGATGCAGAAGCCGCAAATATGGCGGCGGATCAACTTAAGAAAACAAAACTTTCAAGTTCTATACGCTGTTTGGCATCCTCTACTAGACTTTCTAAATCATAG
Protein:  
MEDDGGTSAPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICGTDEYGTATETKALEENCSPKEICDKYHAIHKEVYEWFDISFDKFGRTSTPEQTQVCQAIFNKLFDNNFLSENTMQQLYCDTCKKFLADRLVEGSCPFKECNYDSARGDQCENCGKLLNPTELKDPRCKVCQTTPRIRDTDHLFIELPLLKDKLEEYINETSVTGSWSQNAIQTTKAWLKEGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYQDGISGKFSKSKGVGVFGNDVKSTNIPVEVWRYYLLANRPEVSDTLFTWKDLQAKLTGELLNNLGNFVNRVLTFIAKPEPAGYGSVIPDALGAESHPLTQSMAENVGKFVEQYVEAMEKVKLKQGLKIAMSISNEGNAYLQEAKFWKLYKEDKPSCAIVIRSAAGLVHLLAQLLEPFMPSFSREVFKQLNLPLQFSLSDEGGEVLLASRPWEILPRNHKIGTPQPLFKELTDEEVQQYKDKFAGNQADRRARDAEAANMAADQLKKTKLSSSIRCLASSTRLSKS